BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB009A01LP1|AL425953
(822 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig720 1215 0.0
3x_Contig1278 412 e-115
>3x_Contig720
Length = 2178
Score = 1215 bits (613), Expect = 0.0
Identities = 627/629 (99%), Gaps = 2/629 (0%)
Strand = Plus / Plus
Query: 1 gatcaacacactaagaatggaaagagctccaaatataaaaccacccacggcttaaccaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1551 gatcaacacactaagaatggaaagagctccaaatataaaaccacccacggcttaaccaaa 1610
Query: 61 acaatacatgttactgaattcttttctgtaccaataaggcaaatgtttcccccaacactt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1611 acaatacatgttactgaattcttttctgtaccaataaggcaaatgtttcccccaacactt 1670
Query: 121 cgcaaatgaggttaaacgaggagaaaaaggtaccaaaaaatggtgtggtcccagcaacat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1671 cgcaaatgaggttaaacgaggagaaaaaggtaccaaaaaatggtgtggtcccagcaacat 1730
Query: 181 ttaaactcttggcggtattaaacccttcctaatctgtcaggcttttcgcaaatctagaac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1731 ttaaactcttggcggtattaaacccttcctaatctgtcaggcttttcgcaaatctagaac 1790
Query: 241 taaaagttactgctgaactggtctttcttggaagaagaacactcacaaactgagtagtgc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1791 taaaagttactgctgaactggtctttcttggaagaagaacactcacaaactgagtagtgc 1850
Query: 301 aggtatgtagctgaggaaaaaagtctactggagacttcctgtctcaaacagcaaacagat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1851 aggtatgtagctgaggaaaaaagtctactggagacttcctgtctcaaacagcaaacagat 1910
Query: 361 gaacaccttccatctacactaaggtacatcgcatattcccgtattttcaaacaatttccc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1911 gaacaccttccatctacactaaggtacatcgcatattcccgtattttcaaacaatttccc 1970
Query: 421 aaatcgcttctcgttttccgttttgctaaccccagcagtatgcggnttattgtgtcgatc 480
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 1971 aaatcgcttctcgttttccgttttgctaaccccagcagtatgcgg-ttattgtgtcgatc 2029
Query: 481 tggtccttcttgtgccttttttttttgtttacctttccagctactggagtttctgagctt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2030 tggtccttcttgtgccttttttttttgtttacctttccagctactggagtttctgagctt 2089
Query: 541 tgcaggctccaaaatggcatccttctgaaccgacgtacacgtgcttc-tatttccgtctt 599
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 2090 tgcaggctccaaaatggcatccttctgaaccgacgtacacgtgcttcttatttccgtctt 2149
Query: 600 atagagtttcgaaaccctgccgagcaaaa 628
|||||||||||||||||||||||||||||
Sbjct: 2150 atagagtttcgaaaccctgccgagcaaaa 2178
>3x_Contig1278
Length = 6932
Score = 412 bits (208), Expect = e-115
Identities = 225/228 (98%), Gaps = 2/228 (0%)
Strand = Plus / Minus
Query: 595 gtcttatagagtttcgaaaccctgccgagcaaaagaaacaaagccaaagaaaactacatg 654
||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 6911 gtcttatagagtt-cgaaacc-tgccgagcaaaagaaacaaagccaaagaaaactacatg 6854
Query: 655 acaggatgacgtcttttgggaattcaccaatggggttttctcagaaaaccctatcgttta 714
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 6853 acaggatgacgtcttttggaaattcaccaatggggttttctcagaaaaccctatcgttta 6794
Query: 715 tgctcgcaaagaaaaaggaaaaacacattgaaaagggaatgttaaaaaaatagagtgaaa 774
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6793 tgctcgcaaagaaaaaggaaaaacacattgaaaagggaatgttaaaaaaatagagtgaaa 6734
Query: 775 acaggaatggtactgacgttacagtggtttcagcagaaaaaacactgg 822
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6733 acaggaatggtactgacgttacagtggtttcagcagaaaaaacactgg 6686
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7666
Number of Sequences: 1807
Number of extensions: 7666
Number of successful extensions: 58
Number of sequences better than 1.0e-20: 2
length of query: 822
length of database: 10,358,551
effective HSP length: 16
effective length of query: 806
effective length of database: 10,329,639
effective search space: 8325689034
effective search space used: 8325689034
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)